Proteogenomics data for deciphering Frankia coriariae interactions with root exudates from three host plants☆
Identifieur interne : 000402 ( Main/Exploration ); précédent : 000401; suivant : 000403Proteogenomics data for deciphering Frankia coriariae interactions with root exudates from three host plants☆
Auteurs : Guylaine Miotello [France] ; Amir Ktari [Tunisie] ; Abdellatif Gueddou [Tunisie] ; Imen Nouioui [Tunisie] ; Faten Ghodhbane-Gtari [Tunisie] ; Jean Armengaud [France] ; Maher Gtari [Tunisie]Source :
- Data in Brief [ 2352-3409 ] ; 2017.
Abstract
Url:
DOI: 10.1016/j.dib.2017.07.009
PubMed: 28765834
PubMed Central: 5526514
Affiliations:
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sort="Gueddou, Abdellatif" uniqKey="Gueddou A" first="Abdellatif" last="Gueddou">Abdellatif Gueddou</name><affiliation wicri:level="1"><nlm:aff id="aff0010">Laboratoire Microorganismes et Biomolécules Actives, Université de Tunis El Manar (FST) & Université de Carthage (INSAT), 2092 Tunis, Tunisia</nlm:aff><country xml:lang="fr">Tunisie</country><wicri:regionArea>Laboratoire Microorganismes et Biomolécules Actives, Université de Tunis El Manar (FST) & Université de Carthage (INSAT), 2092 Tunis</wicri:regionArea></affiliation></author><author><name sortKey="Nouioui, Imen" sort="Nouioui, Imen" uniqKey="Nouioui I" first="Imen" last="Nouioui">Imen Nouioui</name><affiliation wicri:level="1"><nlm:aff id="aff0010">Laboratoire Microorganismes et Biomolécules Actives, Université de Tunis El Manar (FST) & Université de Carthage (INSAT), 2092 Tunis, Tunisia</nlm:aff><country xml:lang="fr">Tunisie</country><wicri:regionArea>Laboratoire Microorganismes et Biomolécules Actives, Université de Tunis El Manar (FST) & Université de Carthage (INSAT), 2092 Tunis</wicri:regionArea></affiliation></author><author><name sortKey="Ghodhbane Gtari, Faten" sort="Ghodhbane Gtari, Faten" uniqKey="Ghodhbane Gtari F" first="Faten" last="Ghodhbane-Gtari">Faten Ghodhbane-Gtari</name><affiliation wicri:level="1"><nlm:aff id="aff0010">Laboratoire Microorganismes et Biomolécules Actives, Université de Tunis El Manar (FST) & Université de Carthage (INSAT), 2092 Tunis, Tunisia</nlm:aff><country xml:lang="fr">Tunisie</country><wicri:regionArea>Laboratoire Microorganismes et Biomolécules Actives, Université de Tunis El Manar (FST) & Université de Carthage (INSAT), 2092 Tunis</wicri:regionArea></affiliation></author><author><name sortKey="Armengaud, Jean" sort="Armengaud, Jean" uniqKey="Armengaud J" first="Jean" last="Armengaud">Jean Armengaud</name><affiliation wicri:level="1"><nlm:aff id="aff0005">CEA, DRF/JOLIOT/DMTS/SPI/Li2D, Lab Innovative Technologies for Detection and Diagnostic, Bagnols-sur-Cèze, France</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>CEA, DRF/JOLIOT/DMTS/SPI/Li2D, Lab Innovative Technologies for Detection and Diagnostic, Bagnols-sur-Cèze</wicri:regionArea></affiliation></author><author><name sortKey="Gtari, Maher" sort="Gtari, Maher" uniqKey="Gtari M" first="Maher" last="Gtari">Maher Gtari</name><affiliation wicri:level="1"><nlm:aff id="aff0010">Laboratoire Microorganismes et Biomolécules Actives, Université de Tunis El Manar (FST) & Université de Carthage (INSAT), 2092 Tunis, Tunisia</nlm:aff><country xml:lang="fr">Tunisie</country><wicri:regionArea>Laboratoire Microorganismes et Biomolécules Actives, Université de Tunis El Manar (FST) & Université de Carthage (INSAT), 2092 Tunis</wicri:regionArea></affiliation></author></analytic><series><title level="j">Data in Brief</title><idno type="eISSN">2352-3409</idno><imprint><date when="2017">2017</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p><italic>Frankia coriariae</italic> BMG5.1 cells were incubated with root exudates derived from compatible (<italic>Coriaria myrtifolia</italic>), incompatible (<italic>Alnus glutinosa</italic>) and non-actinorhizal (<italic>Cucumis melo</italic>) host plants. Bacteria cells and their exoproteomes were analyzed by high-throughput proteomics using a Q-Exactive HF high resolution tandem mass spectrometer incorporating an ultra-high-field orbitrap analyzer. MS/MS spectra were assigned with two protein sequence databases derived from the closely-related genomes from strains BMG5.1 andDg1, the <italic>Frankia</italic> symbiont of <italic>Datisca glomerata</italic>. The tandem mass spectrometry data accompanying the manuscript describing the database searches and comparative analysis (Ktari et al., 2017, doi.org/10.3389/fmicb.2017.00720) <xref rid="bib1" ref-type="bibr">[1]</xref> have been deposited to the ProteomeXchange with identifiers PXD005979 (whole cell proteomes) and PXD005980 (exoproteome data).</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Ktari, A" uniqKey="Ktari A">A. Ktari</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Wei, W" uniqKey="Wei W">W. Wei</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Scheltema, R A" uniqKey="Scheltema R">R.A. Scheltema</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kelstrup, C D" uniqKey="Kelstrup C">C.D. Kelstrup</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Armengaud, J" uniqKey="Armengaud J">J. Armengaud</name></author><author><name sortKey="Hartmann, E M" uniqKey="Hartmann E">E.M. Hartmann</name></author><author><name sortKey="Bland, C" uniqKey="Bland C">C. Bland</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Broadbent, J A" uniqKey="Broadbent J">J.A. Broadbent</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Hartmann, E M" uniqKey="Hartmann E">E.M. Hartmann</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Klein, G" uniqKey="Klein G">G. Klein</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Clair, G" uniqKey="Clair G">G. Clair</name></author><author><name sortKey="Armengaud, J" uniqKey="Armengaud J">J. Armengaud</name></author><author><name sortKey="Duport, C" uniqKey="Duport C">C. Duport</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Madeira, J P" uniqKey="Madeira J">J.P. Madeira</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Rubiano Labrador, C" uniqKey="Rubiano Labrador C">C. Rubiano-Labrador</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Sghaier, H" uniqKey="Sghaier H">H. Sghaier</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>France</li><li>Tunisie</li></country></list><tree><country name="France"><noRegion><name sortKey="Miotello, Guylaine" sort="Miotello, Guylaine" uniqKey="Miotello G" first="Guylaine" last="Miotello">Guylaine Miotello</name></noRegion><name sortKey="Armengaud, Jean" sort="Armengaud, Jean" uniqKey="Armengaud J" first="Jean" last="Armengaud">Jean Armengaud</name></country><country name="Tunisie"><noRegion><name sortKey="Ktari, Amir" sort="Ktari, Amir" uniqKey="Ktari A" first="Amir" last="Ktari">Amir Ktari</name></noRegion><name sortKey="Ghodhbane Gtari, Faten" sort="Ghodhbane Gtari, Faten" uniqKey="Ghodhbane Gtari F" first="Faten" last="Ghodhbane-Gtari">Faten Ghodhbane-Gtari</name><name sortKey="Gtari, Maher" sort="Gtari, Maher" uniqKey="Gtari M" first="Maher" last="Gtari">Maher Gtari</name><name sortKey="Gueddou, Abdellatif" sort="Gueddou, Abdellatif" uniqKey="Gueddou A" first="Abdellatif" last="Gueddou">Abdellatif Gueddou</name><name sortKey="Nouioui, Imen" sort="Nouioui, Imen" uniqKey="Nouioui I" first="Imen" last="Nouioui">Imen Nouioui</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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